Peptide Database

Peptide NamePeptide chain B in PDB 3DVM

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length22 amino acids

Chemical FormulaC119H192N32O30S4

DescriptionStandard

        HMGKIYAAMMIMEYYRQSKAKK
    

Molecular Weight2679.25 Da

Isoelectric Point (pI)9.87

Net Charge (pH 7.0)3.84

Net Charge (pH 7.4) 3.58

Charge Density (pH 7.0) 0.1747

GRAVY Index-0.61

Hydrophobic Moment 0.43

Boman Index-0.10

Instability Index37.93

Aliphatic Index 49.09

Aromaticity 0.1364

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4470.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1030.39

LogP -5.91

H-bond Donors 37.0

H-bond Acceptors 39.0

Rotatable Bonds 94.0

Heavy Atoms 185.0

Ring Count 4.0

Amide Bonds 22.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0388354 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3DVM receptor chain A

MethodProtein-peptide complex structure