Peptide Database

Peptide NameS-type pyocin colicin family protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length397 amino acids

Chemical FormulaC1936H3014N530O576S9

DescriptionStandard

        MATRKKDIPQVRNPSGGDGHYVTYRDMNASELAERDARQRAYEAMLARQAAYEQARWATVDSKPLSSVTGSVFAKSCKLPNGIIDYSNPNGYVPADLVKQYGDLMWLGGRSADSSGTIPLKQIGAATVPVTLGRLALGGSATSTAAAAGGTVGAAMLTGIVALLWPSSLGDSALYSEDQLRDIKQARSRMRLSIEQQADGSLKGYGFYTGQHPDWEMVDVVQFTPRADHFIADLGDGIELIWTPATNPSDTLGIPALEAAPQAPPIWIYPPTPMADSIIVDPIYPPEYRDFILVFPADSGVRPVYVVLSVPGDHKYYTPPSLLPAFPDAKIAPSKTFVRGGGVKRRRWKDRKGKIYEWDSQHGAVELYTKQGQHLGEYDPITGEQTKPANPIRKVEK
    

Molecular Weight43218.43 Da

Isoelectric Point (pI)7.02

Net Charge (pH 7.0)0.05

Net Charge (pH 7.4) -0.59

Charge Density (pH 7.0) 0.0001

GRAVY Index-0.36

Hydrophobic Moment 0.67

Boman Index0.02

Instability Index39.22

Aliphatic Index 78.94

Aromaticity 0.0882

Extinction Coeff. Reduced 72310.00

Extinction Coeff. Oxidized 72310.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0285077 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas fluorescens Q2-87 [Bacterium]

FamilyPyocin/Colicin

Tax ID1038922

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal