Peptide Database

Peptide NamePyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length395 amino acids

Chemical FormulaC1863H2920N500O588S9

DescriptionStandard

        MSGYVPNPPKGYRYSGGEPVDIHAQRWAEYPNISTQAEAQEDTLGCVFAKSCNLPDGQIDHSKQSGFVPTEKLAEYGLWAVLSTGVAISLQGTPLQLVGGSTTGSTIAQRLGGSLSLSLLKGSGVVAAGAVVGTIGMLIPNTSISPDSAFYKKDQYAALDVGRTRVRVNVKTLPDGSVNAYGFYTGGKRDWENVPVIEAKKDGENYVADIGNGIGLTWTPAASSEEVMGIPALEGVPQLPPVWVYPPTAQSDTLLANPAHPPEFQDAIIWFPDSGIEPIYIVLSTQLEKNKAAGAEFEDKTYGDFSEEMEESGQQVTIKTESGTRTRLDMIGRDANGDINCVECKASDTAPLTRNQKQAFPEIERSGGTIVGKGKPGFPGGTVLPPTRVDIVRPK
    

Molecular Weight42018.70 Da

Isoelectric Point (pI)4.90

Net Charge (pH 7.0)-12.22

Net Charge (pH 7.4) -12.75

Charge Density (pH 7.0) -0.0309

GRAVY Index-0.30

Hydrophobic Moment 0.62

Boman Index0.06

Instability Index40.06

Aliphatic Index 78.51

Aromaticity 0.0734

Extinction Coeff. Reduced 52370.00

Extinction Coeff. Oxidized 52620.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0383388 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas fluorescens [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal