Peptide Database

Peptide NameCyclotide mden-N

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length31 amino acids

Chemical FormulaC137H224N38O43S6

DescriptionStandard

        GTIPCGESCVYIPCLTSALGCSCKNKVCYRN
    

Molecular Weight3283.86 Da

Isoelectric Point (pI)8.33

Net Charge (pH 7.0)1.70

Net Charge (pH 7.4) 1.40

Charge Density (pH 7.0) 0.0548

GRAVY Index0.26

Hydrophobic Moment 0.31

Boman Index0.10

Instability Index29.80

Aliphatic Index 72.26

Aromaticity 0.0645

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1297.77

LogP -16.28

H-bond Donors 51.0

H-bond Acceptors 51.0

Rotatable Bonds 103.0

Heavy Atoms 224.0

Ring Count 4.0

Amide Bonds 32.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0142182 VERIFIED: NO

Provenance & Taxonomy

OrganismMelicytus dentatus [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized cyclotide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial