Peptide Database

Peptide NamePeptide chain M in PDB 5WA4

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length11 amino acids

Chemical FormulaC59H92N12O19S

DescriptionStandard

        LNDLPMDVFEL
    

Molecular Weight1305.50 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-3.23

Net Charge (pH 7.4) -3.44

Charge Density (pH 7.0) -0.2941

GRAVY Index0.43

Hydrophobic Moment 0.43

Boman Index0.26

Instability Index19.75

Aliphatic Index 132.73

Aromaticity 0.0909

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 500.52

LogP -1.77

H-bond Donors 15.0

H-bond Acceptors 17.0

Rotatable Bonds 41.0

Heavy Atoms 91.0

Ring Count 2.0

Amide Bonds 11.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0021409 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5WA4 receptor chain A

MethodProtein-peptide complex structure