Peptide Database

Peptide NameCycloviolacin VY1

Function Ontology

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Standard StatusStandard

Sequence Length26 amino acids

Chemical FormulaC117H188N32O36S6

DescriptionStandard

        CGESCVWIPCISTVIGCSCSNKVCYR
    

Molecular Weight2811.33 Da

Isoelectric Point (pI)7.77

Net Charge (pH 7.0)0.70

Net Charge (pH 7.4) 0.41

Charge Density (pH 7.0) 0.0270

GRAVY Index0.66

Hydrophobic Moment 0.36

Boman Index0.19

Instability Index31.63

Aliphatic Index 78.46

Aromaticity 0.0769

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7365.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1087.51

LogP -12.87

H-bond Donors 45.0

H-bond Acceptors 43.0

Rotatable Bonds 87.0

Heavy Atoms 191.0

Ring Count 4.0

Amide Bonds 26.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0329023 VERIFIED: YES

Provenance & Taxonomy

OrganismChassalia chartacea [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)