Peptide Database

Peptide NameRidA family protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length103 amino acids

Chemical FormulaC480H786N142O141S4

DescriptionStandard

        MTSMRTSAAGRKAIAQREGNKLIAYLDGVGLWIGVGHPTPAGPPAVKKGLKITAAESDQILTRDLADVEATINKAVKVPLNAGLQHRWNSFCKVHAAQEVECA
    

Molecular Weight10930.50 Da

Isoelectric Point (pI)9.34

Net Charge (pH 7.0)3.75

Net Charge (pH 7.4) 3.33

Charge Density (pH 7.0) 0.0364

GRAVY Index-0.13

Hydrophobic Moment 0.59

Boman Index0.04

Instability Index33.99

Aliphatic Index 91.07

Aromaticity 0.0388

Extinction Coeff. Reduced 12490.00

Extinction Coeff. Oxidized 12615.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 4525.80

LogP -47.44

H-bond Donors 157.0

H-bond Acceptors 152.0

Rotatable Bonds 363.0

Heavy Atoms 767.0

Ring Count 14.0

Amide Bonds 110.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0265457 VERIFIED: NO

Provenance & Taxonomy

OrganismRhizobium leguminosarum [Bacterium]

Tax ID384

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic Non-hemolytic Non-ribosomal