Peptide Database

Peptide NameColicin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length375 amino acids

Chemical FormulaC1777H2838N476O550S5

DescriptionStandard

        MKAAHTFRMPAAGTTQLSVAAGSIALTAGSSTTLETAIQAAIQALKAALGTVVSVTSAVGIGALTYSSSLGNGELPATMLTLPAKSLAPDLPANLSAIAAAGGTVDLPYRIYGDSSKYSVIATQANGGISRRVPVKALSLDPVANAYTFTTADASPVTLTFPIATPANSSTATPAKPVPVPVYTGVTLTPLEIKAVPLPVADQLDIRDAIYIYPADSGLPPIYVVFNSPYEGATTKGVHSGRMYNPEKIGGLIQNLDWTAVTVTQNGINLVKLHTRRFPPSDANKIMTSRLERILRGEIPITDIDKRFYTHEIRELERYRALGIADGIDPDDGGIIWNNTHTATLEDYKLKDTHDLFYTPEAIEADDAQIERENR
    

Molecular Weight39830.73 Da

Isoelectric Point (pI)5.57

Net Charge (pH 7.0)-5.94

Net Charge (pH 7.4) -6.54

Charge Density (pH 7.0) -0.0158

GRAVY Index-0.03

Hydrophobic Moment 0.71

Boman Index0.11

Instability Index33.97

Aliphatic Index 95.07

Aromaticity 0.0640

Extinction Coeff. Reduced 33350.00

Extinction Coeff. Oxidized 33350.00

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Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0240268 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas chlororaphis [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal