Peptide Database

Peptide NameGaegurin-6-RN antimicrobial peptide

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length78 amino acids

Chemical FormulaC402H658N98O119S6

DescriptionStandard

        MFPMKKSLLLIFFLGTINLSFCEEERNAEEEKRDGDDEMDVEVQKRFLGPIIKIATGILPTAICKILKNVETLEMEII
    

Molecular Weight8960.50 Da

Isoelectric Point (pI)4.67

Net Charge (pH 7.0)-5.49

Net Charge (pH 7.4) -5.77

Charge Density (pH 7.0) -0.0704

GRAVY Index0.07

Hydrophobic Moment 0.69

Boman Index0.08

Instability Index40.29

Aliphatic Index 110.00

Aromaticity 0.0641

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 125.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 3498.73

LogP -22.73

H-bond Donors 119.0

H-bond Acceptors 120.0

Rotatable Bonds 313.0

Heavy Atoms 625.0

Ring Count 8.0

Amide Bonds 81.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0345844 VERIFIED: NO

Provenance & Taxonomy

OrganismRana nigrovittata [Animal]

FamilyGaegurin

Tax ID127021

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial