Peptide Database

Peptide NamePeptide chain B in PDB 5LVF

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length15 amino acids

Chemical FormulaC68H97N15O26

DescriptionStandard

        PSYSPSPSYSPTSPS
    

Molecular Weight1540.58 Da

Isoelectric Point (pI)5.95

Net Charge (pH 7.0)-0.04

Net Charge (pH 7.4) -0.10

Charge Density (pH 7.0) -0.0029

GRAVY Index-1.13

Hydrophobic Moment 0.01

Boman Index-0.01

Instability Index177.87

Aliphatic Index 0.00

Aromaticity 0.1333

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 623.87

LogP -11.14

H-bond Donors 22.0

H-bond Acceptors 26.0

Rotatable Bonds 37.0

Heavy Atoms 109.0

Ring Count 7.0

Amide Bonds 14.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0185118 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5LVF receptor chain A

MethodProtein-peptide complex structure