Peptide Database

Peptide Namecod beta defensin

Function Ontology

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Standard StatusStandard

Sequence Length38 amino acids

Chemical FormulaC186H284N46O46S6

DescriptionStandard

        WSCPSLSGVCRKVCLPTELFFGPLGCGKGFLCCVSHFL
    

Molecular Weight4092.92 Da

Isoelectric Point (pI)8.34

Net Charge (pH 7.0)1.79

Net Charge (pH 7.4) 1.44

Charge Density (pH 7.0) 0.0471

GRAVY Index0.82

Hydrophobic Moment 0.48

Boman Index0.32

Instability Index32.24

Aliphatic Index 84.47

Aromaticity 0.1316

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5875.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1410.51

LogP -10.77

H-bond Donors 55.0

H-bond Acceptors 55.0

Rotatable Bonds 125.0

Heavy Atoms 284.0

Ring Count 10.0

Amide Bonds 37.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0060271 VERIFIED: YES

Provenance & Taxonomy

OrganismCyprinodon variegatus [Animal]

FamilyDefensin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)