Peptide Database

Peptide NameSD2

Function Ontology

—

Standard StatusStandard

Sequence Length37 amino acids

Chemical FormulaC158H250N50O58S6

DescriptionStandard

        EMGPTMVAEARDCESQSHRFKGPCVSDTNCASVCHGE
    

Molecular Weight3970.37 Da

Isoelectric Point (pI)5.09

Net Charge (pH 7.0)-3.01

Net Charge (pH 7.4) -3.35

Charge Density (pH 7.0) -0.0814

GRAVY Index-0.59

Hydrophobic Moment 0.54

Boman Index-0.11

Instability Index16.65

Aliphatic Index 31.62

Aromaticity 0.0270

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1731.88

LogP -24.88

H-bond Donors 63.0

H-bond Acceptors 63.0

Rotatable Bonds 129.0

Heavy Atoms 272.0

Ring Count 5.0

Amide Bonds 38.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0214581 VERIFIED: YES

Provenance & Taxonomy

OrganismLotus corniculatus [Plant]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)