Peptide Database

Peptide NameColicin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length116 amino acids

Chemical FormulaC612H955N167O164S4

DescriptionStandard

        MYNKGAIGIIPKEIRDKLVGKKFNSFDDFRKEFWKCVANSSYAKEFRSRNIARMLEGNAPIAPKAEHYGKLKSYILHHKQPIEKGGEVYNLDNLIITSPRMHQIILDPAYYFGKKG
    

Molecular Weight13404.41 Da

Isoelectric Point (pI)9.68

Net Charge (pH 7.0)8.84

Net Charge (pH 7.4) 8.36

Charge Density (pH 7.0) 0.0762

GRAVY Index-0.59

Hydrophobic Moment 0.65

Boman Index-0.07

Instability Index48.07

Aliphatic Index 78.28

Aromaticity 0.1207

Extinction Coeff. Reduced 15930.00

Extinction Coeff. Oxidized 15930.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 5367.92

LogP -42.32

H-bond Donors 185.0

H-bond Acceptors 181.0

Rotatable Bonds 454.0

Heavy Atoms 947.0

Ring Count 25.0

Amide Bonds 124.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0303245 VERIFIED: NO

Provenance & Taxonomy

OrganismParageobacillus thermoglucosidasius [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal