Peptide Database

Peptide NamePp-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length42 amino acids

Chemical FormulaC189H319N59O57S7

DescriptionStandard

        KSCCPSTTARNIYNLCRFTGASRDKCCKISGCKIVDGKCKPP
    

Molecular Weight4554.37 Da

Isoelectric Point (pI)9.33

Net Charge (pH 7.0)6.69

Net Charge (pH 7.4) 6.37

Charge Density (pH 7.0) 0.1592

GRAVY Index-0.43

Hydrophobic Moment 0.70

Boman Index-0.19

Instability Index29.74

Aliphatic Index 48.81

Aromaticity 0.0476

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1894.49

LogP -25.36

H-bond Donors 74.0

H-bond Acceptors 71.0

Rotatable Bonds 151.0

Heavy Atoms 312.0

Ring Count 5.0

Amide Bonds 43.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0175667 VERIFIED: YES

Provenance & Taxonomy

OrganismOryza sativa [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)