Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length412 amino acids

Chemical FormulaC1979H3115N555O601S12

DescriptionStandard

        MGKDTPQVWQHYDNDGGGYRRLRDMTTTELAEREARQNAYEAMLARQDAFEKCREVAFQKKRQSLTGCVFAKSCKLPDSIIDYTCPSGFVPTDSVGEYGELTLLGGRQADDSGCLPLKKISGVLPAGIGSLALGGVAIAPASIASTGAGVVTAGVAAGALVGLVALLAPSSLGDGALYTDDQLRSLKQARTRVRLRVEEQADGTLKGYGYNTQSRRDWEMVPIVTFETRGSQQVADFGSGVELIWTPAENLADTMGIPALEAAPQAPQVWIFPPAEQADNIIVSPVYPPEYQDFILVFPADSGVRPLYVVLSVRRKGLPGIGHSYHPSPMIEEITGFPGLKEAKKITPQQGGGGLRERWTDAKGRTVYEWDSMHGELEVYRASDGSHLGSFNHVTGERIDDPKPRRNIKKFL
    

Molecular Weight44683.04 Da

Isoelectric Point (pI)5.81

Net Charge (pH 7.0)-4.96

Net Charge (pH 7.4) -5.66

Charge Density (pH 7.0) -0.0120

GRAVY Index-0.31

Hydrophobic Moment 0.67

Boman Index0.01

Instability Index46.55

Aliphatic Index 80.75

Aromaticity 0.0777

Extinction Coeff. Reduced 53860.00

Extinction Coeff. Oxidized 54110.00

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Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0116568 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas lini [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal

MethodQualitative functional evidence