Peptide Database

Peptide NamePn-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC160H238N48O56S8

DescriptionStandard

        EQCGKQAGGALCPNGLCCSEWGWCGNTADYCGPGCQSQC
    

Molecular Weight3986.41 Da

Isoelectric Point (pI)4.14

Net Charge (pH 7.0)-2.24

Net Charge (pH 7.4) -2.53

Charge Density (pH 7.0) -0.0574

GRAVY Index-0.36

Hydrophobic Moment 0.40

Boman Index0.08

Instability Index26.10

Aliphatic Index 27.69

Aromaticity 0.0769

Extinction Coeff. Reduced 12490.00

Extinction Coeff. Oxidized 12990.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1660.50

LogP -24.62

H-bond Donors 62.0

H-bond Acceptors 62.0

Rotatable Bonds 124.0

Heavy Atoms 272.0

Ring Count 7.0

Amide Bonds 44.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0118435 VERIFIED: YES

Provenance & Taxonomy

OrganismJuglans regia [Plant]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)