Peptide Database

Peptide NamePermuted papain-like amidase enzyme; YaeF YiiX; C92 family

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length151 amino acids

Chemical FormulaC727H1171N209O220S3

DescriptionStandard

        MTKQKANLDLYGQSLNKIYSLAGGAEGPGKTYYNDGRHVPTIGIGYAAVVLGRDGRWVVKPTLEADMRAAKIPLGDSQKKTLRAIADELNKGENADTKRLDGMITALRGPELTPEQTKALFTQSYARFYDQTRNIIGDPLFAALSPKRQGG
    

Molecular Weight16455.54 Da

Isoelectric Point (pI)9.55

Net Charge (pH 7.0)5.60

Net Charge (pH 7.4) 5.28

Charge Density (pH 7.0) 0.0371

GRAVY Index-0.54

Hydrophobic Moment 0.69

Boman Index-0.06

Instability Index46.15

Aliphatic Index 79.60

Aromaticity 0.0728

Extinction Coeff. Reduced 15930.00

Extinction Coeff. Oxidized 15930.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 6955.97

LogP -73.75

H-bond Donors 240.0

H-bond Acceptors 230.0

Rotatable Bonds 552.0

Heavy Atoms 1159.0

Ring Count 21.0

Amide Bonds 163.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0301056 VERIFIED: NO

Provenance & Taxonomy

OrganismVarunaivibrio sulfuroxidans [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal