Peptide Database

Peptide NameVv-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC124H197N41O41S4

DescriptionStandard

        RTCESQSHRFKGLCFSKSNCASVCHTE
    

Molecular Weight3046.40 Da

Isoelectric Point (pI)8.54

Net Charge (pH 7.0)1.90

Net Charge (pH 7.4) 1.53

Charge Density (pH 7.0) 0.0705

GRAVY Index-0.65

Hydrophobic Moment 0.45

Boman Index-0.23

Instability Index46.81

Aliphatic Index 28.89

Aromaticity 0.0741

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1355.51

LogP -20.13

H-bond Donors 53.0

H-bond Acceptors 49.0

Rotatable Bonds 102.0

Heavy Atoms 210.0

Ring Count 4.0

Amide Bonds 28.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0338717 VERIFIED: YES

Provenance & Taxonomy

OrganismNicotiana tabacum [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)