Peptide Database

Peptide NameCycloviolacin VY1

Function Ontology

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Standard StatusStandard

Sequence Length31 amino acids

Chemical FormulaC139H222N34O43S6

DescriptionStandard

        CGESCVFIPCLTAVVGCSCSNKVCYLNELPP
    

Molecular Weight3249.84 Da

Isoelectric Point (pI)4.53

Net Charge (pH 7.0)-1.30

Net Charge (pH 7.4) -1.59

Charge Density (pH 7.0) -0.0418

GRAVY Index0.79

Hydrophobic Moment 0.27

Boman Index0.29

Instability Index49.50

Aliphatic Index 90.97

Aromaticity 0.0645

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1197.90

LogP -12.71

H-bond Donors 45.0

H-bond Acceptors 48.0

Rotatable Bonds 98.0

Heavy Atoms 222.0

Ring Count 5.0

Amide Bonds 32.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0212037 VERIFIED: YES

Provenance & Taxonomy

OrganismOldenlandia affinis [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)