Peptide Database

Peptide NameCathelicidin-derived antimicrobial peptide 1 isoform B

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length198 amino acids

Chemical FormulaC946H1552N282O292S12

DescriptionStandard

        MKMKVQVRSLILLAVAVLQVRSQNQTETRYEDIILVALPQLLPGEEQAFRPILNQLQVETLNTEDVDQSEVSVRLTFPIQETFCSKSQGQPGKPCPLKKNGKLMMCSMKVRHPILEASNNLNTDLSTFVCEYMDAEDALQQKIRTRRSKVRICSRGKNCVSRPGGGSVIGRPGGGSPPGGGSFNDEFIRDHSDGNRFA
    

Molecular Weight21932.94 Da

Isoelectric Point (pI)8.97

Net Charge (pH 7.0)4.65

Net Charge (pH 7.4) 4.20

Charge Density (pH 7.0) 0.0235

GRAVY Index-0.43

Hydrophobic Moment 0.68

Boman Index-0.09

Instability Index55.52

Aliphatic Index 81.16

Aromaticity 0.0455

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 9326.29

LogP -129.11

H-bond Donors 323.0

H-bond Acceptors 311.0

Rotatable Bonds 710.0

Heavy Atoms 1532.0

Ring Count 23.0

Amide Bonds 221.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0181803 VERIFIED: NO

Provenance & Taxonomy

OrganismOncorhynchus mykiss [Animal]

Familycathelicidin

Tax ID8022

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial