Peptide Database

Peptide NamepdBD-2

Function Ontology

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Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC214H319N69O54S6

DescriptionStandard

        DPAVQYWTCGYRGLCRRFCYAQEYIVGHHGCPRRYRCCAVR
    

Molecular Weight4914.64 Da

Isoelectric Point (pI)9.12

Net Charge (pH 7.0)4.87

Net Charge (pH 7.4) 4.47

Charge Density (pH 7.0) 0.1189

GRAVY Index-0.50

Hydrophobic Moment 0.62

Boman Index-0.17

Instability Index26.79

Aliphatic Index 47.56

Aromaticity 0.1707

Extinction Coeff. Reduced 12950.00

Extinction Coeff. Oxidized 13325.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1998.35

LogP -18.24

H-bond Donors 80.0

H-bond Acceptors 67.0

Rotatable Bonds 150.0

Heavy Atoms 343.0

Ring Count 12.0

Amide Bonds 42.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0150282 VERIFIED: YES

Provenance & Taxonomy

OrganismNothobranchius guentheri [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)