Peptide Database

Peptide NamePeptide chain B in PDB 1J2J

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC210H355N61O66S3

DescriptionStandard

        IFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKRM
    

Molecular Weight4886.63 Da

Isoelectric Point (pI)6.79

Net Charge (pH 7.0)-0.14

Net Charge (pH 7.4) -0.41

Charge Density (pH 7.0) -0.0034

GRAVY Index-0.98

Hydrophobic Moment 0.80

Boman Index-0.32

Instability Index64.90

Aliphatic Index 80.98

Aromaticity 0.0244

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2114.69

LogP -18.64

H-bond Donors 72.0

H-bond Acceptors 70.0

Rotatable Bonds 179.0

Heavy Atoms 340.0

Ring Count 3.0

Amide Bonds 43.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0390927 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1J2J receptor chain A

MethodProtein-peptide complex structure