Peptide Database

Peptide NameProtamine 3a

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Standard StatusStandard

Sequence Length32 amino acids

Chemical FormulaC168H321N95O37

DescriptionStandard

        PRRRRRSSSRPIRRRRRPRVSRRRRRGGRRRR
    

Molecular Weight4263.96 Da

Isoelectric Point (pI)12.00

Net Charge (pH 7.0)20.96

Net Charge (pH 7.4) 20.90

Charge Density (pH 7.0) 0.6549

GRAVY Index-2.96

Hydrophobic Moment 0.76

Boman Index-1.56

Instability Index324.52

Aliphatic Index 21.25

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2314.67

LogP -33.67

H-bond Donors 98.0

H-bond Acceptors 58.0

Rotatable Bonds 152.0

Heavy Atoms 300.0

Ring Count 3.0

Amide Bonds 31.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0183807 VERIFIED: NO

Provenance & Taxonomy

OrganismOncorhynchus mykiss,Salmo gairdneri irideus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

DNA-binding