Peptide Database

Peptide NameDNase tRNase domain of colicin-like bacteriocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length421 amino acids

Chemical FormulaC2067H3221N575O608S12

DescriptionStandard

        MNKDKKKNPFDDEWSRRLPNGGASWAAFNPPREPEPVVHLKKDEWPRPKERTDLVFAKSCVPESWSCTKPGTATVPASDFGKVMLVAPMLVPSSIEALKLAVGFDAVLGRIAGSGLLQKGFRWALRGNPTGVFIAGMLSTQMGDGTLYKDDDLRQLSRAPTRVRFQFRRDAEGVMQVYGIHTGPSGDDSVRTVQVKWNATKTVLEADLNGITILWTPRGPLALPPLVHPEQRNADPVILVHPIPENTDSQIEGYPAGDDIETDDCILVFPAGTGLSSLYIVFSKTGPRYGPGTVTGIGEDVSGIWLAGAGEGLGAPIPTRIADALRGREFSSFDKFREAFWEEVASDPTLLSQFKRTNKSKLMDGRAPFAPMPDHYGEKAKYEIHHIEHIQHGGAVYDVDNLAVMTPKRHVEIHKENKNGD
    

Molecular Weight46238.95 Da

Isoelectric Point (pI)6.29

Net Charge (pH 7.0)-3.50

Net Charge (pH 7.4) -4.43

Charge Density (pH 7.0) -0.0083

GRAVY Index-0.41

Hydrophobic Moment 0.88

Boman Index0.00

Instability Index40.34

Aliphatic Index 76.67

Aromaticity 0.0808

Extinction Coeff. Reduced 61420.00

Extinction Coeff. Oxidized 61545.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0060988 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. ok602 [Bacterium]

FamilyColicin/Pyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal