Peptide Database

Peptide NameCcD1

Function Ontology

—

Standard StatusStandard

Sequence Length24 amino acids

Chemical FormulaC115H181N33O36S4

DescriptionStandard

        HMYKSTSQTFKGLCFTDSSCRKAC
    

Molecular Weight2730.13 Da

Isoelectric Point (pI)9.06

Net Charge (pH 7.0)2.81

Net Charge (pH 7.4) 2.51

Charge Density (pH 7.0) 0.1173

GRAVY Index-0.53

Hydrophobic Moment 0.48

Boman Index-0.16

Instability Index70.76

Aliphatic Index 20.42

Aromaticity 0.1250

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1615.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1143.49

LogP -15.31

H-bond Donors 45.0

H-bond Acceptors 44.0

Rotatable Bonds 91.0

Heavy Atoms 188.0

Ring Count 4.0

Amide Bonds 24.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0388738 VERIFIED: YES

Provenance & Taxonomy

OrganismSolanum tuberosum [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)