Peptide Database

Peptide NameCentrocin 1

Function Ontology

—

Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC134H212N44O36S

DescriptionStandard

        WFSRAVHKVSHAVRSGIHTGQGVCSGLGL
    

Molecular Weight3047.45 Da

Isoelectric Point (pI)10.86

Net Charge (pH 7.0)3.01

Net Charge (pH 7.4) 2.64

Charge Density (pH 7.0) 0.1038

GRAVY Index0.17

Hydrophobic Moment 0.76

Boman Index0.15

Instability Index32.49

Aliphatic Index 87.24

Aromaticity 0.0690

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1274.01

LogP -15.00

H-bond Donors 48.0

H-bond Acceptors 43.0

Rotatable Bonds 98.0

Heavy Atoms 215.0

Ring Count 6.0

Amide Bonds 29.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0380736 VERIFIED: YES

Provenance & Taxonomy

OrganismStrongylocentrotus purpuratus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)