Peptide Database

Peptide NameColicin_D domain-containing protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length254 amino acids

Chemical FormulaC1226H1918N322O375S3

DescriptionStandard

        MTVPAKSIAPSLPVNLLAVASSGGSVDVPYRVYGEQHKYSVVATTSSGGVSAKVPVRALTFNASLNAYTFTTADTPSRTLVFPIATPGNSSTSTPAKPVAVPVYTGVTLTPLEIKAEELPAVDQLDIHDCIYCFPAGSGLPPIYAVFSESLDSGKFSRKQLDKKFKHASSFGVTDTRKNIETLSKFRDAVNEHLADVDTSPHGTYQRETDSTVFFNKRTNNVVIIGGDGKFVSGWKLDPATPQFKNYIEKGVLQ
    

Molecular Weight27264.47 Da

Isoelectric Point (pI)8.41

Net Charge (pH 7.0)1.93

Net Charge (pH 7.4) 1.37

Charge Density (pH 7.0) 0.0076

GRAVY Index-0.16

Hydrophobic Moment 0.58

Boman Index0.07

Instability Index40.42

Aliphatic Index 79.41

Aromaticity 0.0906

Extinction Coeff. Reduced 18910.00

Extinction Coeff. Oxidized 19035.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0281762 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. FSL R10-0071 [Bacterium]

Structure & Mods

Configlinear polypeptide/propeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal