Peptide Database

Peptide NameS-type pyocin domain-containing protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length272 amino acids

Chemical FormulaC1382H2133N361O424S3

DescriptionStandard

        MRDHDGRLDIYAVKTGVANVPDKVKIGVAEFDKSKGAYTFITDSTPPRTFIFTPAEPPGAEISPVLSPPDSAPISPQHTGEIEIQPVVTPAILPLPQLDEGDFHDYIIWFPAESGLEPVYVYFNSPYGKTTAKGKYSGRPYNPDKSGGLIQHLDWKDTKINRTGVDKVKLHTKRFGELEDNKLMIERLERILMGELAATDIDKRFYTHEIRELERYRALGVSDGVEDESVWNDAHTATLEDYKINEKTQPLYTPEAKKAYEEAELNQYKGDK
    

Molecular Weight30685.08 Da

Isoelectric Point (pI)5.13

Net Charge (pH 7.0)-11.83

Net Charge (pH 7.4) -12.51

Charge Density (pH 7.0) -0.0435

GRAVY Index-0.66

Hydrophobic Moment 0.67

Boman Index-0.06

Instability Index36.70

Aliphatic Index 75.66

Aromaticity 0.0956

Extinction Coeff. Reduced 37360.00

Extinction Coeff. Oxidized 37360.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0101460 VERIFIED: YES

Provenance & Taxonomy

OrganismYersinia intermedia [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal

TargetEscherichia coli (Gram-negative)