Peptide Database

Peptide NameLysozyme (EC 3.2.1.17)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Enzyme / Catalytic activity ▸ Hydrolase

Enzyme / Catalytic activity ▸ Hydrolase ▸ Glycosidase

Standard StatusStandard

Sequence Length165 amino acids

Chemical FormulaC830H1293N241O238S4

DescriptionStandard

        MPVIDTHQNIAAFLDMLAYSEGTATHPLTKNRGYDVIVTGIDSKPEIFTDYGDHPFAHGRPAKVFNRRGEKSTASGRYQQLYLYWPHYQKQLALPDFSPLSQDKLAIQLIRERGAIEDIRAGRIERAISRCRNIWASLPGAGYGQREHSLDKLVTVWRTAGGVMA
    

Molecular Weight18583.88 Da

Isoelectric Point (pI)9.27

Net Charge (pH 7.0)4.03

Net Charge (pH 7.4) 3.45

Charge Density (pH 7.0) 0.0244

GRAVY Index-0.45

Hydrophobic Moment 0.83

Boman Index-0.04

Instability Index37.58

Aliphatic Index 81.09

Aromaticity 0.0970

Extinction Coeff. Reduced 28420.00

Extinction Coeff. Oxidized 28420.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 7701.96

LogP -74.31

H-bond Donors 271.0

H-bond Acceptors 252.0

Rotatable Bonds 606.0

Heavy Atoms 1313.0

Ring Count 34.0

Amide Bonds 176.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0410964 VERIFIED: NO

Provenance & Taxonomy

OrganismYokenella regensburgei [Animal]

FamilyLysozyme

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Glycosidase Hydrolase