Peptide Database

Peptide NamePapB

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length112 amino acids

Chemical FormulaC579H913N161O175S2

DescriptionStandard

        MNKTKSEHIKQQALDLFTRLQFLLQKHDTIEPYQYVLDILETGISKTKHNQQTPERQARVVYNKIASQALVDKLHFTAEENKVLAAINELAHSQKGWGEFNMLDTTNTWPSQ
    

Molecular Weight12993.55 Da

Isoelectric Point (pI)6.97

Net Charge (pH 7.0)-0.05

Net Charge (pH 7.4) -0.55

Charge Density (pH 7.0) -0.0004

GRAVY Index-0.68

Hydrophobic Moment 0.62

Boman Index-0.09

Instability Index36.73

Aliphatic Index 82.77

Aromaticity 0.0804

Extinction Coeff. Reduced 15470.00

Extinction Coeff. Oxidized 15470.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 5512.59

LogP -54.32

H-bond Donors 185.0

H-bond Acceptors 182.0

Rotatable Bonds 443.0

Heavy Atoms 917.0

Ring Count 19.0

Amide Bonds 129.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0241293 VERIFIED: YES

Provenance & Taxonomy

OrganismPediococcus pentosaceus [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial