Peptide Database

Peptide NamePeptide chain D in PDB 3AVJ

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length8 amino acids

Chemical FormulaC38H66N10O14S

DescriptionStandard

        ALKIDNMD
    

Molecular Weight919.05 Da

Isoelectric Point (pI)4.54

Net Charge (pH 7.0)-1.20

Net Charge (pH 7.4) -1.39

Charge Density (pH 7.0) -0.1500

GRAVY Index-0.30

Hydrophobic Moment 0.20

Boman Index-0.05

Instability Index-12.47

Aliphatic Index 110.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 410.73

LogP -3.39

H-bond Donors 13.0

H-bond Acceptors 14.0

Rotatable Bonds 32.0

Heavy Atoms 63.0

Ring Count 0.0

Amide Bonds 8.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0279046 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3AVJ receptor chain A

MethodProtein-peptide complex structure