Peptide Database

Peptide NameGallidermin nisin family lantibiotic

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length56 amino acids

Chemical FormulaC253H414N68O78S7

DescriptionStandard

        MAKFDDFDLDVTKTAARGGIEPKYKSKSACTPGCPTGILMTCPLKTATCGCHITGK
    

Molecular Weight5880.86 Da

Isoelectric Point (pI)8.69

Net Charge (pH 7.0)2.54

Net Charge (pH 7.4) 2.18

Charge Density (pH 7.0) 0.0453

GRAVY Index-0.17

Hydrophobic Moment 0.56

Boman Index0.03

Instability Index53.59

Aliphatic Index 55.89

Aromaticity 0.0536

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1740.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2310.41

LogP -26.58

H-bond Donors 85.0

H-bond Acceptors 89.0

Rotatable Bonds 192.0

Heavy Atoms 406.0

Ring Count 8.0

Amide Bonds 55.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0197359 VERIFIED: NO

Provenance & Taxonomy

OrganismDorea formicigenerans [Bacterium]

FamilyLantibiotic

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Lantibiotic Non-hemolytic Non-ribosomal

RECORD: Rec_0391677 VERIFIED: NO