Peptide Database

Peptide NamepdBD-2

Function Ontology

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Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC213H319N71O55S7

DescriptionStandard

        DPEMQYWTCGYRGLCRRFCHAQEYIVGHHGCPRRYRCCAVR
    

Molecular Weight4978.71 Da

Isoelectric Point (pI)8.92

Net Charge (pH 7.0)3.96

Net Charge (pH 7.4) 3.51

Charge Density (pH 7.0) 0.0967

GRAVY Index-0.74

Hydrophobic Moment 0.62

Boman Index-0.23

Instability Index26.67

Aliphatic Index 38.05

Aromaticity 0.1463

Extinction Coeff. Reduced 11460.00

Extinction Coeff. Oxidized 11835.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2044.10

LogP -19.28

H-bond Donors 81.0

H-bond Acceptors 69.0

Rotatable Bonds 155.0

Heavy Atoms 346.0

Ring Count 12.0

Amide Bonds 42.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0020439 VERIFIED: YES

Provenance & Taxonomy

OrganismPlaniliza haematocheila [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)