Peptide Database

Peptide NameHymenochirin-3B

Function Ontology

—

Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC125H225N35O33

DescriptionStandard

        KIPPVVKDTLKKVAKGVLSAVAGALSR
    

Molecular Weight2746.34 Da

Isoelectric Point (pI)10.58

Net Charge (pH 7.0)4.76

Net Charge (pH 7.4) 4.55

Charge Density (pH 7.0) 0.1762

GRAVY Index0.38

Hydrophobic Moment 0.69

Boman Index0.09

Instability Index7.61

Aliphatic Index 126.30

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1092.33

LogP -9.43

H-bond Donors 38.0

H-bond Acceptors 38.0

Rotatable Bonds 93.0

Heavy Atoms 193.0

Ring Count 2.0

Amide Bonds 26.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0226252 VERIFIED: YES

Provenance & Taxonomy

OrganismHymenochirus boettgeri [Animal]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)