Peptide Database

Peptide NamePutative cytotoxic protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length405 amino acids

Chemical FormulaC1989H3084N558O588S9

DescriptionStandard

        MDERKDDQWLATRTFPGFPNPPQGDGHHVTHRFMKASELAARDARQNAYDAMLARQEAFERSCEAAVKKANPERAGCVFAKSCNLPDAIIDYSSPSGMVPTDSLKDYGDLILLGAREADESGAVHLKKIGATAIPTGFGSFALAGSAFKALPAIVSSPVITPLVGLVALFMPSSLGDSALYTEEQLRGLQQARTRVRLRVEQQADGSLKGYGFYTGKHRDWEMVDVVQFSARGSEFIADLGEDVELIWTPAVDGSDILGIPALEAAPQAPHIWVYPPTKAADGILVNPVYPPEYRDFILVFPAHSGIRPIYIVLSRARDHVYYGHPETLPAFPDAVRVKSKSSVKGGGKQRARWVDRKGRIYEWDYKSNAVEKYDKLGTTHLGEFNHLTGEQTGPAEPDRRTSRN
    

Molecular Weight44509.74 Da

Isoelectric Point (pI)6.43

Net Charge (pH 7.0)-2.51

Net Charge (pH 7.4) -3.44

Charge Density (pH 7.0) -0.0062

GRAVY Index-0.38

Hydrophobic Moment 0.71

Boman Index-0.01

Instability Index38.74

Aliphatic Index 77.63

Aromaticity 0.0914

Extinction Coeff. Reduced 55350.00

Extinction Coeff. Oxidized 55475.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0033427 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. GM80 [Bacterium]

Tax ID1144339

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal