Peptide Database

Peptide NameDermaseptin PD-3-3

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Standard StatusStandard

Sequence Length36 amino acids

Chemical FormulaC152H260N46O46S

DescriptionStandard

        GMWSKIKNAGKAAAKASKKAAGKAALGAVSEALGEQ
    

Molecular Weight3500.04 Da

Isoelectric Point (pI)10.13

Net Charge (pH 7.0)4.76

Net Charge (pH 7.4) 4.54

Charge Density (pH 7.0) 0.1322

GRAVY Index-0.24

Hydrophobic Moment 0.63

Boman Index0.03

Instability Index6.54

Aliphatic Index 71.11

Aromaticity 0.0278

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1501.22

LogP -18.24

H-bond Donors 52.0

H-bond Acceptors 52.0

Rotatable Bonds 125.0

Heavy Atoms 245.0

Ring Count 2.0

Amide Bonds 37.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0121577 VERIFIED: NO

Provenance & Taxonomy

OrganismPachymedusa dacnicolor [Animal]

FamilyDermaseptin

Structure & Mods

Configlinear peptide [Linear]

Chiralitymixed L/D amino-acid peptide [Mixed]

Bio-Activity Profile

Function

Antimicrobial Antibacterial