Peptide Database

Peptide NameCyclotide mden-C

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC133H211N35O39S6

DescriptionStandard

        GKPICGETCFKGKCYTPGCTCSYPVCKKN
    

Molecular Weight3116.70 Da

Isoelectric Point (pI)8.87

Net Charge (pH 7.0)3.70

Net Charge (pH 7.4) 3.39

Charge Density (pH 7.0) 0.1275

GRAVY Index-0.41

Hydrophobic Moment 0.26

Boman Index-0.04

Instability Index9.70

Aliphatic Index 23.45

Aromaticity 0.1034

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1183.62

LogP -14.04

H-bond Donors 46.0

H-bond Acceptors 49.0

Rotatable Bonds 98.0

Heavy Atoms 213.0

Ring Count 6.0

Amide Bonds 29.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0217967 VERIFIED: NO

Provenance & Taxonomy

OrganismMelicytus dentatus [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized cyclotide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial