Peptide Database

Peptide NameLysin A

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length408 amino acids

Chemical FormulaC1976H3044N566O572S9

DescriptionStandard

        MVTMPVEKDFYVTSGFGPRWGTHHWGVDFGAPGGSGGRPVYAVKDGTVARSGPASGFGQWVGIDHPATNGGGETIYGHIIPEVKAGQQVKEGQRIGHINPNRATNGGVDPHLHLEWHRYTWTPPGPDRLDPMKKLTGARWPGEKDTTMTDNAVDIDLHHLIPFGRPTPLPKKIIIVHTTENAPGTPSRNIIDYQVRTQSGSYHRLVDATGKITMANTDDWQTWSTGNKGNDIALHVSCVAQAKMTREQWLAQPKMLEGVARVIAHWSKKYQIPLVKLSRAELGAGKHGVAGHLEAQVWGNTTHWDPGYHFPYDVVLRRAAEINKPAAPEKEPAPVPQITVPDTTAPQADRDQLIYEQLCGPGAPGTFPGWPQLGNRTLVDAVAAIGDKLGIDGFKSPLIGDAAAGAPK
    

Molecular Weight44169.34 Da

Isoelectric Point (pI)7.86

Net Charge (pH 7.0)2.09

Net Charge (pH 7.4) 0.84

Charge Density (pH 7.0) 0.0051

GRAVY Index-0.48

Hydrophobic Moment 0.73

Boman Index0.03

Instability Index29.81

Aliphatic Index 71.99

Aromaticity 0.0760

Extinction Coeff. Reduced 86400.00

Extinction Coeff. Oxidized 86525.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0337926 VERIFIED: NO

Provenance & Taxonomy

OrganismCorynebacterium phage SamW [Virus]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal