Peptide Database

Peptide NamePeptide chain C in PDB 5VMR

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length38 amino acids

Chemical FormulaC192H306N50O58S3

DescriptionStandard

        DMFCALKIKFFLEIGDEDAARKAAKKCGYSEEQAERII
    

Molecular Weight4338.98 Da

Isoelectric Point (pI)5.18

Net Charge (pH 7.0)-1.25

Net Charge (pH 7.4) -1.50

Charge Density (pH 7.0) -0.0328

GRAVY Index-0.29

Hydrophobic Moment 0.61

Boman Index-0.07

Instability Index29.65

Aliphatic Index 77.37

Aromaticity 0.1053

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1615.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1775.87

LogP -13.54

H-bond Donors 63.0

H-bond Acceptors 60.0

Rotatable Bonds 153.0

Heavy Atoms 303.0

Ring Count 4.0

Amide Bonds 38.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0392260 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5VMR receptor chain A

MethodProtein-peptide complex structure