Peptide Database

Peptide NameJindongenin-1D

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive

Standard StatusStandard

Sequence Length24 amino acids

Chemical FormulaC116H210N32O33S4

DescriptionStandard

        DSMDAVKLAKLLIDKMRCKVTKVC
    

Molecular Weight2709.36 Da

Isoelectric Point (pI)9.24

Net Charge (pH 7.0)2.74

Net Charge (pH 7.4) 2.50

Charge Density (pH 7.0) 0.1141

GRAVY Index0.20

Hydrophobic Moment 0.63

Boman Index-0.09

Instability Index5.62

Aliphatic Index 109.58

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 125.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1076.98

LogP -8.19

H-bond Donors 40.0

H-bond Acceptors 40.0

Rotatable Bonds 98.0

Heavy Atoms 185.0

Ring Count 0.0

Amide Bonds 23.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0133864 VERIFIED: YES

Provenance & Taxonomy

Organismsynthetic construct [Synthetic]

Tax ID32630

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

N-TermNone

C-TermNone

Bio-Activity Profile

Function

Antimicrobial Antibacterial Anti-Gram-positive Anti-Gram-negative

TargetStaphylococcus aureus

Activity28 μg/mL

MethodMIC

RECORD: Rec_0294149 VERIFIED: YES