Peptide Database

Peptide NameGarvicins AG1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC215H317N59O65

DescriptionStandard

        GRETLAQDIKRVYDSIWPNDTAWYTGKNNKTNIPPYSPYGH
    

Molecular Weight4768.17 Da

Isoelectric Point (pI)8.31

Net Charge (pH 7.0)0.85

Net Charge (pH 7.4) 0.58

Charge Density (pH 7.0) 0.0206

GRAVY Index-1.20

Hydrophobic Moment 0.74

Boman Index-0.14

Instability Index44.56

Aliphatic Index 50.00

Aromaticity 0.1463

Extinction Coeff. Reduced 16960.00

Extinction Coeff. Oxidized 16960.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2021.23

LogP -20.73

H-bond Donors 69.0

H-bond Acceptors 67.0

Rotatable Bonds 146.0

Heavy Atoms 339.0

Ring Count 13.0

Amide Bonds 45.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0386006 VERIFIED: YES

Provenance & Taxonomy

Organismsynthetic construct [Synthetic]

Tax ID32630

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial

TargetActive against Lactococcus garvieae