Peptide Database

Peptide NamepdBD-2

Function Ontology

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Standard StatusStandard

Sequence Length42 amino acids

Chemical FormulaC222H342N74O57S7

DescriptionStandard

        DTDVQRWTCGYRGLCRKHCYAREYMIGYRGCPRRYRCCALRF
    

Molecular Weight5184.01 Da

Isoelectric Point (pI)9.50

Net Charge (pH 7.0)6.79

Net Charge (pH 7.4) 6.43

Charge Density (pH 7.0) 0.1616

GRAVY Index-0.81

Hydrophobic Moment 0.61

Boman Index-0.35

Instability Index31.40

Aliphatic Index 39.52

Aromaticity 0.1667

Extinction Coeff. Reduced 12950.00

Extinction Coeff. Oxidized 13325.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2171.82

LogP -20.51

H-bond Donors 89.0

H-bond Acceptors 72.0

Rotatable Bonds 166.0

Heavy Atoms 360.0

Ring Count 10.0

Amide Bonds 42.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0105546 VERIFIED: YES

Provenance & Taxonomy

OrganismDanio rerio [Animal]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)