Peptide Database

Peptide NamePyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length488 amino acids

Chemical FormulaC2301H3603N655O710S17

DescriptionStandard

        MKRYNITTGAKTTAGGEVISGMARTSFSGQMIAREGDRVACPACGTEGFIALTGPHLHEEWGGKQAALEGDLCICKCDPPPELIACQWSKSQVFETQPQRDTFTWTGLNTPNPPVSNFAVPGAVNRGADACVFAKSCVSVPAGSTAAGTGPEQAKNFGTTAVMASTGTAGAVGRVAGTLGSDLGAWAVRGLAAASSTLNVVLLAFWPRDIGDSTLYSPAQLAGMRSASTRVRFQFRQDESGELRVYGIHTKPESGADRVPVAQARWNTDNSAMVAVLDGISIMWTPNHGPVVNVPSPYPGTPERLDNLFVHPVAVGQDSAISHYPGREAENATWQDTIISFPADSGLPPLYLVFTKPMVTPLEVGAYDDLSSRSIKDGYDIDHLPARKVLEAVLLKLDGEMDPREIRDYLRRAPSIAIPARVHQQYSETYGGRSTKAKQVQDASDLRAAVDSNFNAIKRGLLEEGFTDADIEVAREQLHRLAKEQGWY
    

Molecular Weight52347.29 Da

Isoelectric Point (pI)5.68

Net Charge (pH 7.0)-7.72

Net Charge (pH 7.4) -8.61

Charge Density (pH 7.0) -0.0158

GRAVY Index-0.26

Hydrophobic Moment 0.91

Boman Index0.03

Instability Index38.53

Aliphatic Index 76.23

Aromaticity 0.0738

Extinction Coeff. Reduced 67380.00

Extinction Coeff. Oxidized 67880.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0037483 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. Root569 [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal