Peptide Database

Peptide NameColicin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length208 amino acids

Chemical FormulaC1020H1595N279O300S3

DescriptionStandard

        MSKIFVTIQAARVPPDPSDTFGIPALEGAPQAPQIWIYPPSEKADSIIVNPIYPPEYKDLILVFPADSGIQPLYIVMNVRLDPGTVTGQGKDVTGIWLAGATSGLGAPIPTEIADQLRGKSFASFDSFTRALWKAVAGTGLVEQFTDNSVDRMREGKAPKARYRDRAGKRSSFELHHTDEVAKGGKVYDVDNLNVVTPKHHIDIHRNG
    

Molecular Weight22662.46 Da

Isoelectric Point (pI)6.52

Net Charge (pH 7.0)-1.04

Net Charge (pH 7.4) -1.56

Charge Density (pH 7.0) -0.0050

GRAVY Index-0.28

Hydrophobic Moment 0.70

Boman Index0.04

Instability Index30.93

Aliphatic Index 83.94

Aromaticity 0.0817

Extinction Coeff. Reduced 25440.00

Extinction Coeff. Oxidized 25440.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0120405 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas lundensis [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal