Peptide Database

Peptide NameS-type pyocin domain-containing protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length398 amino acids

Chemical FormulaC1869H2929N501O583S9

DescriptionStandard

        MSGYVPNPPKGYRNTGVEPVDVNAQHWAQYKDLPATPDVKPEPLGCVFAKSCNLPDGEINHTNQAGFVPVEKLADYGLWAVLATGAAITAEGTSLQLVGGSTAGSAIAQRLGGSLALGLLESAGALAAGAAVGTIALLMPNTNLAPDSAFYKTDQYATLETGRTRVRVNVKTLPDGSVSAYGFYTGGKKDWENVPVIKAEKDGEKYVADVGNGIGLTWTPAANSDGVLGIPALEGVPQLPPVWVYPPTEKSDTLLANPAHPPEFQDAIIWFPDDAGLEPIYIVLSTQLEKNKAAGAAFEEEAYSGFSEEMEESGQQVTIKTESGTRTRLDMIGRDANGDIACVECKASETAPLTRNQKRAFPEIEQSGGRIMGKGKPGFPGGTQIPPTRVEILRPPQK
    

Molecular Weight42033.84 Da

Isoelectric Point (pI)4.87

Net Charge (pH 7.0)-13.21

Net Charge (pH 7.4) -13.75

Charge Density (pH 7.0) -0.0332

GRAVY Index-0.28

Hydrophobic Moment 0.64

Boman Index0.08

Instability Index36.37

Aliphatic Index 79.00

Aromaticity 0.0704

Extinction Coeff. Reduced 50880.00

Extinction Coeff. Oxidized 51130.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0070939 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. 43A [Bacterium]

FamilyPyocin/Colicin

Tax ID2743971

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal