Peptide Database

Peptide NameDetoxification

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length387 amino acids

Chemical FormulaC1937H3023N535O564S6

DescriptionStandard

        MSERLYPPTEEDLRKRRILTPQPSRVPYSPSVDFFEPSPAPTPTLTKPPGCVFIKPCQLPDGITHYFNPAGYVPLELIKEYGHLSLLGGREVDGRGAVALRKIGGSALPAGLGQLALRSAVLESAATAVGSVAGGLLTGLVALAWPSRLGDSALYSEEQLRSMQRARSQMRLHIEQREDGTLKGYGFYTGNHADWQMIDVVQFQSRGDQFVADLDEGVELIWTPAVDPSDTLGIPALEAAPQAPVIWIYPPTEKAAQILVNPIYPSEYRDFILVFPVESGVRPLYVVVNEPRKGLKNPDFGYHPAPRTEDITGFPGLIEQKRKTRKRNGGGLRERWKDAKGKKLFEWDSEQGELEVYRYSDVKHLGSFDPYTGERRGPAKDERRIDK
    

Molecular Weight43021.36 Da

Isoelectric Point (pI)6.64

Net Charge (pH 7.0)-0.93

Net Charge (pH 7.4) -1.59

Charge Density (pH 7.0) -0.0024

GRAVY Index-0.46

Hydrophobic Moment 0.64

Boman Index-0.03

Instability Index53.62

Aliphatic Index 81.40

Aromaticity 0.0904

Extinction Coeff. Reduced 56840.00

Extinction Coeff. Oxidized 56965.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0041463 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas marginalis pv. marginalis [Bacterium]

FamilyColicin/Bacteriocin

Structure & Mods

Configlinear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic

MethodQualitative functional evidence