Peptide Database

Peptide NameTu-AMP 1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive

Antimicrobial ▸ Antifungal

Standard StatusStandard

Sequence Length46 amino acids

Chemical FormulaC207H345N65O62S8

DescriptionStandard

        KSCCRNTVARNCYNVCRIPGTPRPVCAATCDCKLITGTKCPPGYEK
    

Molecular Weight4992.87 Da

Isoelectric Point (pI)9.08

Net Charge (pH 7.0)5.68

Net Charge (pH 7.4) 5.35

Charge Density (pH 7.0) 0.1235

GRAVY Index-0.36

Hydrophobic Moment 0.70

Boman Index-0.15

Instability Index27.57

Aliphatic Index 50.87

Aromaticity 0.0435

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2046.26

LogP -26.43

H-bond Donors 79.0

H-bond Acceptors 76.0

Rotatable Bonds 156.0

Heavy Atoms 342.0

Ring Count 7.0

Amide Bonds 48.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0407697 VERIFIED: YES

Provenance & Taxonomy

OrganismTulipa gesneriana [Plant]

FamilyChitin-binding, Thionin

Structure & Mods

Configdisulfide-constrained cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Disulfidemultiple disulfide bonds reported, sites not specified

Bio-Activity Profile

Function

Antimicrobial Antibacterial Antifungal Anti-Gram-negative

TargetAgrobacterium rhizogenes

Activity20 μg/mL

MethodIC50

RECORD: Rec_0423374 VERIFIED: YES