Peptide Database

Peptide NamePp-AMP2

Function Ontology

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Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC165H276N54O54S6

DescriptionStandard

        KSCCPSSTARNIYNVCRFGGASRSVCASLSGCKIVQGGTC
    

Molecular Weight4072.68 Da

Isoelectric Point (pI)9.18

Net Charge (pH 7.0)4.70

Net Charge (pH 7.4) 4.40

Charge Density (pH 7.0) 0.1174

GRAVY Index0.12

Hydrophobic Moment 0.72

Boman Index0.01

Instability Index59.90

Aliphatic Index 58.50

Aromaticity 0.0500

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1758.74

LogP -28.32

H-bond Donors 70.0

H-bond Acceptors 65.0

Rotatable Bonds 133.0

Heavy Atoms 279.0

Ring Count 3.0

Amide Bonds 42.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0146982 VERIFIED: YES

Provenance & Taxonomy

OrganismPhoradendron liga [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)