Peptide Database

Peptide NamePeptide chain E in PDB 2SEB

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length12 amino acids

Chemical FormulaC46H73N15O16S

DescriptionStandard

        AYMRADAAAGGA
    

Molecular Weight1124.23 Da

Isoelectric Point (pI)5.88

Net Charge (pH 7.0)-0.20

Net Charge (pH 7.4) -0.39

Charge Density (pH 7.0) -0.0170

GRAVY Index0.22

Hydrophobic Moment 0.15

Boman Index0.18

Instability Index35.63

Aliphatic Index 50.00

Aromaticity 0.0833

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 502.85

LogP -6.45

H-bond Donors 18.0

H-bond Acceptors 17.0

Rotatable Bonds 34.0

Heavy Atoms 78.0

Ring Count 1.0

Amide Bonds 11.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0327900 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 2SEB receptor chain B

MethodProtein-peptide complex structure