Peptide Database

Peptide NamePyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length402 amino acids

Chemical FormulaC1898H2966N522O576S9

DescriptionStandard

        MSGYVPKPARPNASTTTRNSGVEPVDLHALYWAQYPDLADESQARPTPTGCVFAKSCNLPDGVINHQHPTGFVPVEKLADYGMWAVLGTGTAISAQGSPLQWVAGSASGRAVANRLAGSLALTLLEGAGALAASATVGTVALLMPNAIAADSAFYTQDQYATLEAGRTRVRVNVKTLPDGSVNAYGFYTGGKADWESVPVIKAEKKGEQYVADIGNGIGLTWTPAVNPQGVLGIPALEGAPPLRTVWVYPPTPQAEAALHNPQHPPEFQDAIIWFPADAGIEPIYVVLSTQLEKNKVAGAAYEEEFHSSFSEQMKASAQQVTFKTERGTRVRVDMIGRTHNGEIVCVECKASETAPLTRNQKRAFPEIEESGAVIVGKGKPGFPGGTVISPTTIKISRPNQN
    

Molecular Weight42601.59 Da

Isoelectric Point (pI)6.02

Net Charge (pH 7.0)-3.88

Net Charge (pH 7.4) -4.60

Charge Density (pH 7.0) -0.0096

GRAVY Index-0.19

Hydrophobic Moment 0.64

Boman Index0.09

Instability Index33.98

Aliphatic Index 78.93

Aromaticity 0.0746

Extinction Coeff. Reduced 56380.00

Extinction Coeff. Oxidized 56630.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0147653 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. ICMP 460 [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal